| Abbreviation | Term | Path | Used in |
|---|
| SON | supraoptic nucleus | Die::Hy::SON | rodent, carnivore, primate |
| SOX | supraoptic commissure | | primate |
| SpC | spinal cord | SpC | rodent, carnivore, primate |
| SPC | nucleus superficialis parvocellularis (nucleus tractus septomesencephalici) | | avian |
| SPf | subparafascicular nucleus | Die::Th::SPf | rodent, carnivore, primate |
| SpL | nucleus spiriformis lateralis | | avian |
| SpM | nucleus spiriformis medialis | | avian |
| SPS | subparietal sulcus | Tel::Cx::SPS | primate |
| Spt | septum | Tel::Spt | rodent, carnivore, primate |
| SpTV | spinal tract of trigeminal | | rodent, carnivore, primate |
| SRt | nucleus subrotundus | | avian |
| SSp | supraspinal nucleus | | rodent, carnivore, primate |
| ST | solitary tract | Me::ST | rodent, carnivore, primate |
| ST | stria terminalis | | avian |
| STG | superior temporal gyrus | Tel::STG | primate |
| STN | triangular septal nucleus | Tel::Spt::STN | rodent, carnivore, primate |
| STr | stria terminalis | | rodent, carnivore, primate |
| STS | superior temporal sulcus | Tel::Cx::STS | primate |
| TB | trapezoid body | | rodent, carnivore, primate |
| TD | dorsal tegmental nucleus | | rodent, carnivore, primate |
| Te | temporal cortex | Tel::Cx::Te | rodent, carnivore, primate |
| Tec | tectum | MB::Tec | rodent, carnivore, primate |
| Tel | telencephalon | Tel | rodent, carnivore, primate |
| TeO | tectum opticum | | avian |
| Th | dorsal thalamus | Die::Th | rodent, carnivore, primate |
| TM | tubero-mamillary area | Die::Hy::TM | rodent, carnivore, primate |
| Tn | nucleus taeniae | | avian |
| TO | tuberculum olfactorium | | avian |
| TOv | tractus nuclei ovoidalis | | avian |
| TrO | tractus opticus | | avian |
| TSM | tractus septomesencephalicus | | avian |
| TSp | tectospinal tract | | rodent, carnivore, primate |
| TT | taenia tecta (including indusium griseum) | Tel::TT | rodent, carnivore, primate |
| TU | lateral tuberal nucleus | | primate |
| TX | tegmental decussations | MB::TX | rodent, carnivore, primate |
| V | trigeminal nuclear complex | | rodent, carnivore, primate |
| V | ventral nuclear group of thalamus | | rodent, carnivore, primate |
| V1 | primary visual cortex | Tel::Cx::V1 | rodent, carnivore, primate |
| V2 | secondary visual cortex | Tel::Cx::V2 | rodent, carnivore, primate |
| VA | ventral anterior nucleus of thalamus | Die::Th::VA | rodent, carnivore, primate |
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